Transcript: LINC01233:2

Basic information

LNCipedia transcript ID: LINC01233:2 
LNCipedia gene ID: LINC01233
RefSeq ID: NR_110663
Location (hg38): chr19:22532626-22533494
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 613 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110663; NR_110663.1
Alternative gene names: XLOC_013014; LINC01233


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 55.23 non-coding 
CPAT coding probability 19.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01233:2 no no no no

Available literature

  1. Li (2014), LncRNA profile study reveals a three-lncRNA signature associated with the survival of patients with oesophageal squamous cell carcinoma., Gut


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF492-1:8
4.0 LINC01233:2
4.1 LINC01233:2
5.0 LINC01233:2
5.1 LINC01233:2
5.2 LINC01233:2