Transcript: LINC01233:5

Basic information

LNCipedia transcript ID: LINC01233:5 
LNCipedia gene ID: LINC01233
Location (hg38): chr19:22532687-22533120
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 250 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT063798
Alternative gene names: XLOC_013014


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 8.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01233:5 no no no no

Available literature

  1. Li (2014), LncRNA profile study reveals a three-lncRNA signature associated with the survival of patients with oesophageal squamous cell carcinoma., Gut


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF492-1:6
4.0 LINC01233:5
4.1 LINC01233:5
5.0 LINC01233:5
5.1 LINC01233:5
5.2 LINC01233:5