Transcript: LINC01237:1

Basic information

LNCipedia transcript ID: LINC01237:1 
HGNC Gene Symbol: LINC01237    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1237
Ensembl Gene ID: ENSG00000233806
Ensembl Transcript ID: ENST00000430555
Location (hg38): chr2:241881363-241966440
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 843 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000430555.1; AC131097.3-002; OTTHUMT00000322317.1; NONHSAT077999; ENST00000430555.5
Alternative gene names: ENSG00000233806.2; AC131097.3; OTTHUMG00000151343.2; ENSG00000233806.3; ENSG00000233806.7; LINC01237;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 37.9607 non-coding 
CPAT coding probability 3.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01237:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CXXC11-4:1
4.0 LINC01237:1
4.1 LINC01237:1
5.0 LINC01237:1
5.1 LINC01237:1
5.2 LINC01237:1