Transcript: LINC01239:10

Basic information

LNCipedia transcript ID: LINC01239:10 
LNCipedia gene ID: LINC01239
Location (hg38): chr9:22238193-22674624
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 644 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000234840.1|FTMT23500014634.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -70.6257 non-coding 
CPAT coding probability 96.29% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01239:10 yes no no no

Available literature

  1. Peffers (2015), Transcriptome analysis of ageing in uninjured human Achilles tendon., Arthritis Res. Ther.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC01239:10
5.0 LINC01239:10
5.1 LINC01239:10
5.2 LINC01239:10