Transcript: LINC01239:12

Basic information

LNCipedia transcript ID: LINC01239:12 
LNCipedia gene ID: LINC01239
Location (hg38): chr9:22646198-22876946
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 706 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000234840.1|HBMT00001460029.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -67.6023 non-coding 
CPAT coding probability 93.35% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01239:12 no no no no

Available literature

  1. Peffers (2015), Transcriptome analysis of ageing in uninjured human Achilles tendon., Arthritis Res. Ther.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC01239:12
5.0 LINC01239:12
5.1 LINC01239:12
5.2 LINC01239:12