Transcript: LINC01241:12

Basic information

LNCipedia transcript ID: LINC01241:12 
LNCipedia gene ID: LINC01241
Location (hg38): chr9:25780056-25784562
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 463 bp
Exons: 3
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: TCONS_00015657; ENST00000423326; ENST00000423326.1; RP11-33G16.1-001; OTTHUMT00000051953.1; NONHSAT147671
Alternative gene names: XLOC_007306; linc-IFT74-1; ENSG00000236306; RP11-33G16.1; ENSG00000236306.1; OTTHUMG00000019705.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -118.9879 non-coding 
CPAT coding probability 0.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01241:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-IFT74-3:2
3.1 lnc-IFT74-3:2
4.0 lnc-IFT74-3:2
4.1 lnc-IFT74-3:2
5.0 lnc-IFT74-3:2
5.1 LINC01241:3
5.2 LINC01241:12