Transcript: LINC01241:13

Basic information

LNCipedia transcript ID: LINC01241:13 
HGNC Gene Symbol: LINC01241    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1241
Ensembl Gene ID: ENSG00000236306
Ensembl Transcript ID: ENST00000423326
RefSeq ID: NR_121604
Location (hg38): chr9:25780056-25812968
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1237 bp
Exons: 6
Sources: NONCODE v4; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT130503; NR_121604; ENST00000423326.2; NR_121604.1
Alternative gene names: ENSG00000236306.2; LINC01241


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.6337 non-coding 
CPAT coding probability 0.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01241:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IFT74-3:8
4.0 lnc-IFT74-3:8
4.1 lnc-IFT74-3:8
5.0 lnc-IFT74-3:8
5.1 LINC01241:4
5.2 LINC01241:13