Transcript: LINC01257:4

Basic information

LNCipedia transcript ID: LINC01257:4 
LNCipedia gene ID: LINC01257
Location (hg38): chr12:131165011-131212930
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2472 bp
Exons: 5
Sources: Broad Institute
Alternative transcript names: TCONS_00020164
Alternative gene names: XLOC_009957; linc-SFSWAP-3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 18.2187 non-coding 
CPAT coding probability 76.56% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01257:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GPR133-1:4
3.1 lnc-GPR133-1:4
4.0 LINC01257:4
4.1 LINC01257:4
5.0 LINC01257:4
5.1 LINC01257:4
5.2 LINC01257:4