Transcript: LINC01262:2

Basic information

LNCipedia transcript ID: LINC01262:2 
LNCipedia gene ID: LINC01262
RefSeq ID: NR_121679
Location (hg38): chr4:189659606-189661486
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 878 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_121679; NR_121679.1
Alternative gene names: TCONS_l2_00021807; RP11-462G22.1; LINC01262


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -100.6943 non-coding 
CPAT coding probability 8.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01262:2 no no no no

Available literature

  1. Gui (2015), Altered microRNA profiles in cerebrospinal fluid exosome in Parkinson disease and Alzheimer disease., Oncotarget
  2. Soreq (2014), Long non-coding RNA and alternative splicing modulations in Parkinson's leukocytes identified by RNA sequencing., PLoS Comput. Biol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FRG1-3:2
4.0 LINC01262:2
4.1 LINC01262:2
5.0 LINC01262:2
5.1 LINC01262:2
5.2 LINC01262:2