Transcript: LINC01266:1

Basic information

LNCipedia transcript ID: LINC01266:1 
HGNC Gene Symbol: LINC01266    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1266
Ensembl Gene ID: ENSG00000224957
Ensembl Transcript ID: ENST00000420823
Location (hg38): chr3:536231-846015
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3948 bp
Exons: 5
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000420823; ENST00000420823.1; AC090044.1-001; OTTHUMT00000337457.1; NONHSAT087568; ENST00000420823.5
Alternative gene names: ENSG00000224957; AC090044.1; ENSG00000224957.1; OTTHUMG00000154876.1; ENSG00000224957.5; LINC01266;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -3.6557 non-coding 
CPAT coding probability 1.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01266:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CHL1-3:1
3.1 lnc-CHL1-3:1
4.0 LINC01266:1
4.1 LINC01266:1
5.0 LINC01266:1
5.1 LINC01266:1
5.2 LINC01266:1