Transcript: LINC01270:5

Basic information

LNCipedia transcript ID: LINC01270:5 
LNCipedia gene ID: LINC01270
Location (hg38): chr20:50293562-50314920
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2672 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00028215; NONHSAT080293
Alternative gene names: XLOC_013560; linc-PTPN1-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -50.5429 non-coding 
CPAT coding probability 0.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01270:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CEBPB-7:4
3.1 lnc-CEBPB-7:4
4.0 LINC01270:5
4.1 LINC01270:5
5.0 LINC01270:5
5.1 LINC01270:5
5.2 LINC01270:5