Transcript: LINC01270:7

Basic information

LNCipedia transcript ID: LINC01270:7 
HGNC Gene Symbol: LINC01270    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1270
Ensembl Gene ID: ENSG00000203999
Ensembl Transcript ID: ENST00000457853
Location (hg38): chr20:50310974-50312014
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 943 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000457853; TCONS_00027949; ENST00000457853.1; RP11-290F20.1-002; OTTHUMT00000079679.1; NONHSAT147172
Alternative gene names: ENSG00000203999; XLOC_013560; linc-PTPN1-2; RP11-290F20.1; ENSG00000203999.4; OTTHUMG00000032719.1; ENSG00000203999.8; LINC01270;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.4256 non-coding 
CPAT coding probability 29.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01270:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CEBPB-7:5
3.1 lnc-CEBPB-7:5
4.0 LINC01270:7
4.1 LINC01270:7
5.0 LINC01270:7
5.1 LINC01270:7
5.2 LINC01270:7