Transcript: LINC01281:12

Basic information

LNCipedia transcript ID: LINC01281:12 
LNCipedia gene ID: LINC01281
Ensembl Gene ID: ENSG00000224610
Ensembl Transcript ID: ENST00000438026
Location (hg38): chrX:39226103-39299786
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 828 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000438026; ENST00000438026.1; RP11-265P11.1-001; OTTHUMT00000060658.1; NONHSAT136664
Alternative gene names: ENSG00000224610; RP11-265P11.1; ENSG00000224610.1; OTTHUMG00000024094.1; ; AC108879.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -121.0156 non-coding 
CPAT coding probability 4.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01281:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BCOR-4:1
3.1 lnc-BCOR-5:1
4.0 lnc-BCOR-5:1
4.1 LINC01281:12
5.0 LINC01281:12
5.1 LINC01281:12
5.2 LINC01281:12