Transcript: LINC01285:7

Basic information

LNCipedia transcript ID: LINC01285:7 
HGNC Gene Symbol: LINC01285    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1285
Ensembl Gene ID: ENSG00000203650
Ensembl Transcript ID: ENST00000608172
Location (hg38): chrX:118839590-118882015
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 803 bp
Exons: 7
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000608172.1
Alternative gene names: ENSG00000203650.3; RP4-562J12.2; ENSG00000203650.8; LINC01285;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -197.1097 non-coding 
CPAT coding probability 23.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01285:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZCCHC12-1:6
4.0 LINC01285:7
4.1 LINC01285:7
5.0 LINC01285:7
5.1 LINC01285:7
5.2 LINC01285:7