Transcript: LINC01311:1

Basic information

LNCipedia transcript ID: LINC01311:1 
LNCipedia gene ID: LINC01311
Location (hg38): chr22:19171395-19172832
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1438 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000565162.1; AC004463.6-001; OTTHUMT00000420341.1; NONHSAT083392
Alternative gene names: ENSG00000260924.1; AC004463.6; OTTHUMG00000172740.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -78.9544 non-coding 
CPAT coding probability 32.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01311:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TSSK2-2:1
4.0 LINC01311:1
4.1 LINC01311:1
5.0 LINC01311:1
5.1 LINC01311:1
5.2 LINC01311:1