Transcript: LINC01311:2

Basic information

LNCipedia transcript ID: LINC01311:2 
HGNC Gene Symbol: LINC01311    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1311
Ensembl Gene ID: ENSG00000260924
Ensembl Transcript ID: ENST00000565162
Location (hg38): chr22:19171395-19172839
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1445 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000565162.2
Alternative gene names: ENSG00000260924.2; AC004463.6; LINC01311;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -78.9544 non-coding 
CPAT coding probability 32.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01311:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TSSK2-2:2
4.0 LINC01311:2
4.1 LINC01311:2
5.0 LINC01311:2
5.1 LINC01311:2
5.2 LINC01311:2