Transcript: LINC01320:19

Basic information

LNCipedia transcript ID: LINC01320:19 
HGNC Gene Symbol: LINC01320    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1320
Ensembl Gene ID: ENSG00000228262
Ensembl Transcript ID: ENST00000453774
Location (hg38): chr2:34713590-34738231
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1205 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000453774; ENST00000453774.1; AC073218.2-002; OTTHUMT00000325419.1; NONHSAT070046
Alternative gene names: ENSG00000228262; AC073218.2; ENSG00000228262.1; OTTHUMG00000152144.1; ENSG00000228262.4; ENSG00000228262.8; LINC01320;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 19.0117 non-coding 
CPAT coding probability 0.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01320:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RASGRP3-4:2
3.1 lnc-RASGRP3-4:2
4.0 LINC01320:19
4.1 LINC01320:19
5.0 LINC01320:19
5.1 LINC01320:19
5.2 LINC01320:19