Transcript: LINC01339:2

Basic information

LNCipedia transcript ID: LINC01339:2 
LNCipedia gene ID: LINC01339
RefSeq ID: NR_120601
Location (hg38): chr5:90158339-90290071
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 573 bp
Exons: 6
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_120601; NR_120601.1
Alternative gene names: ; LINC01339


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -314.4004 non-coding 
CPAT coding probability 0.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01339:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CETN3-3:5
4.0 LINC01339:2
4.1 LINC01339:2
5.0 LINC01339:2
5.1 LINC01339:2
5.2 LINC01339:2