Transcript: LINC01341:22

Basic information

LNCipedia transcript ID: LINC01341:22 
LNCipedia gene ID: LINC01341
Location (hg38): chr1:246789525-246792488
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 711 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00001355; NONHSAT010741
Alternative gene names: XLOC_000643; linc-VN1R5-3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -191.678 non-coding 
CPAT coding probability 8.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01341:22 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SCCPDH-1:9
3.1 lnc-SCCPDH-1:12
4.0 LINC01341:22
4.1 LINC01341:22
5.0 LINC01341:22
5.1 LINC01341:22
5.2 LINC01341:22