Transcript: LINC01341:23

Basic information

LNCipedia transcript ID: LINC01341:23 
LNCipedia gene ID: LINC01341
RefSeq ID: NR_015422
Location (hg38): chr1:246789617-246791486
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1123 bp
Exons: 2
Sources: Broad Institute; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: TCONS_00000012; NR_015422; NR_015422.1
Alternative gene names: XLOC_000643; linc-VN1R5-3; ; LINC01341


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 61.4175 coding 
CPAT coding probability 61.79% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01341:23 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SCCPDH-1:10
3.1 lnc-SCCPDH-1:13
4.0 LINC01341:23
4.1 LINC01341:23
5.0 LINC01341:23
5.1 LINC01341:23
5.2 LINC01341:23