Transcript: LINC01341:8

Basic information

LNCipedia transcript ID: LINC01341:8 
LNCipedia gene ID: LINC01341
Location (hg38): chr1:246776063-246792364
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1430 bp
Exons: 6
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00002270; NONHSAT010728
Alternative gene names: XLOC_000643; linc-VN1R5-3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 61.4175 coding 
CPAT coding probability 8.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01341:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SCCPDH-1:3
3.1 lnc-SCCPDH-1:5
4.0 LINC01341:8
4.1 LINC01341:8
5.0 LINC01341:8
5.1 LINC01341:8
5.2 LINC01341:8