Transcript: LINC01343:3

Basic information

LNCipedia transcript ID: LINC01343:3 
LNCipedia gene ID: LINC01343
Location (hg38): chr1:38211831-38212757
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 575 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00001459
Alternative gene names: XLOC_000788; linc-POU3F1-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -135.7772 non-coding 
CPAT coding probability 41.18% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01343:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-POU3F1-1:3
3.1 lnc-POU3F1-1:3
4.0 LINC01343:3
4.1 LINC01343:3
5.0 LINC01343:3
5.1 LINC01343:3
5.2 LINC01343:3