Transcript: LINC01343:5

Basic information

LNCipedia transcript ID: LINC01343:5 
LNCipedia gene ID: LINC01343
Location (hg38): chr1:38054363-38212451
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2826 bp
Exons: 7
Sources: NONCODE v4
Alternative transcript names: NONHSAT002499
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -92.675 non-coding 
CPAT coding probability 43.18% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01343:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-POU3F1-1:5
4.0 LINC01343:5
4.1 LINC01343:5
5.0 LINC01343:5
5.1 LINC01343:5
5.2 LINC01343:5