Transcript: LINC01344:1

Basic information

LNCipedia transcript ID: LINC01344:1 
HGNC Gene Symbol: LINC01344    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1344
Ensembl Gene ID: ENSG00000228918
Ensembl Transcript ID: ENST00000449842
RefSeq ID: NR_104175
Location (hg38): chr1:182203945-182314061
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 571 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000449842.1; GS1-122H1.2-002; OTTHUMT00000091038.1; NONHSAT008310; NR_104175; NR_104175.1
Alternative gene names: ENSG00000228918.1; GS1-122H1.2; OTTHUMG00000037403.1; ENSG00000228918.3; LINC01344;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -68.2692 non-coding 
CPAT coding probability 0.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01344:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GLUL-1:1
4.0 LINC01344:1
4.1 LINC01344:1
5.0 LINC01344:1
5.1 LINC01344:1
5.2 LINC01344:1