Transcript: LINC01350:1

Basic information

LNCipedia transcript ID: LINC01350:1 
HGNC Gene Symbol: LINC01350    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1350
Ensembl Gene ID: ENSG00000228309
Ensembl Transcript ID: ENST00000436955
Location (hg38): chr1:185607184-185628527
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 642 bp
Exons: 5
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00000700; ENST00000436955; ENST00000436955.1; GS1-204I12.1-001; OTTHUMT00000086350.1; NONHSAT008432
Alternative gene names: XLOC_001126; linc-IVNS1ABP; ENSG00000232279; GS1-204I12.1; ENSG00000232279.1; OTTHUMG00000035577.1; ENSG00000228309.2; ENSG00000228309.6; LINC01350;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.5964 non-coding 
CPAT coding probability 0.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01350:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-IVNS1ABP-1:1
3.1 lnc-IVNS1ABP-2:1
4.0 LINC01350:1
4.1 LINC01350:1
5.0 LINC01350:1
5.1 LINC01350:1
5.2 LINC01350:1