Transcript: LINC01356:2

Basic information

LNCipedia transcript ID: LINC01356:2 
HGNC Gene Symbol: LINC01356    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1356
Ensembl Gene ID: ENSG00000215866
Ensembl Transcript ID: ENST00000401018
Location (hg38): chr1:112820174-112850643
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1819 bp
Exons: 7
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00000095; ENST00000401018; ENST00000401018.1; RP11-426L16.8-001; OTTHUMT00000033258.1; ENST00000401018.5
Alternative gene names: XLOC_000966; linc-PPM1J; ENSG00000215866; RP11-426L16.8; ENSG00000215866.2; OTTHUMG00000012022.2; ENSG00000215866.3; ENSG00000215866.7; LINC01356;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 34.2765 non-coding 
CPAT coding probability 57.31% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01356:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SLC16A1-1:1
3.1 lnc-SLC16A1-1:1
4.0 LINC01356:2
4.1 LINC01356:2
5.0 LINC01356:2
5.1 LINC01356:2
5.2 LINC01356:2