Transcript: LINC01360:13

Basic information

LNCipedia transcript ID: LINC01360:13 
HGNC Gene Symbol: LINC01360    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1360
Ensembl Gene ID: ENSG00000233973
Ensembl Transcript ID: ENST00000411903
Location (hg38): chr1:73306239-73307572
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 441 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00000230; ENST00000411903; ENST00000411903.1; RP4-598G3.1-003; OTTHUMT00000026415.1; NONHSAT003945
Alternative gene names: XLOC_000256; linc-FPGT-2; ENSG00000233973; RP4-598G3.1; ENSG00000233973.1; OTTHUMG00000009566.1; ENSG00000233973.6; LINC01360;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -230.9297 non-coding 
CPAT coding probability 5.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01360:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FPGT-2:10
3.1 lnc-FPGT-3:10
4.0 LINC01360:13
4.1 LINC01360:13
5.0 LINC01360:13
5.1 LINC01360:13
5.2 LINC01360:13