Transcript: LINC01362:3

Basic information

LNCipedia transcript ID: LINC01362:3 
HGNC Gene Symbol: LINC01362    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1362
Ensembl Gene ID: ENSG00000230817
Ensembl Transcript ID: ENST00000419658
Location (hg38): chr1:82907562-82997561
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 338 bp
Exons: 4
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00000243; ENST00000419658; ENST00000419658.1; RP4-601K24.1-002; OTTHUMT00000026938.1; NONHSAT004149
Alternative gene names: XLOC_000269; linc-PRKACB-4; ENSG00000230817; RP4-601K24.1; ENSG00000230817.1; OTTHUMG00000009769.1; ENSG00000230817.5; LINC01362;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 21.3514 non-coding 
CPAT coding probability 3.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01362:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LPHN2-2:2
3.1 lnc-LPHN2-2:2
4.0 LINC01362:3
4.1 LINC01362:3
5.0 LINC01362:3
5.1 LINC01362:3
5.2 LINC01362:3