Transcript: LINC01364:6

Basic information

LNCipedia transcript ID: LINC01364:6 
HGNC Gene Symbol: LINC01364    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1364
Ensembl Gene ID: ENSG00000227290
Ensembl Transcript ID: ENST00000452509
RefSeq ID: NR_038324
Location (hg38): chr1:87353524-87371655
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 889 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000452509; ENST00000452509.1; RP4-544H6.2-001; OTTHUMT00000028275.1; NONHSAT004302; NR_038324.1
Alternative gene names: ENSG00000227290; RP4-544H6.2; ENSG00000227290.1; OTTHUMG00000010252.1; LINC01364;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -61.4171 non-coding 
CPAT coding probability 1.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01364:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP4-604K5.1.1-2:6
3.1 lnc-RP4-604K5.1.1-5:5
4.0 LINC01364:6
4.1 LINC01364:6
5.0 LINC01364:6
5.1 LINC01364:6
5.2 LINC01364:6