Transcript: LINC01370:1

Basic information

LNCipedia transcript ID: LINC01370:1 
LNCipedia gene ID: LINC01370
Location (hg38): chr20:40003982-40012304
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6679 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT079730; FPKM1_group_19204_transcript_4
Alternative gene names: HI-LNC25


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.8606 non-coding 
CPAT coding probability 5.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01370:1 no no no no

Available literature

  1. Morán (2012), Human β cell transcriptome analysis uncovers lncRNAs that are tissue-specific, dynamically regulated, and abnormally expressed in type 2 diabetes., Cell Metab.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DHX35-2:3
4.0 LINC01370:1
4.1 LINC01370:1
5.0 LINC01370:1
5.1 LINC01370:1
5.2 LINC01370:1