Transcript: LINC01374:16

Basic information

LNCipedia transcript ID: LINC01374:16 
HGNC Gene Symbol: LINC01374    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1374
Ensembl Gene ID: ENSG00000280560
Ensembl Transcript ID: ENST00000629067
Location (hg38): chr10:89853906-89914948
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 415 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000629067.1
Alternative gene names: ENSG00000280560.1; LINC01374; AL138924.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -261.1911 non-coding 
CPAT coding probability 1.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01374:16 no no no no

Available literature

  1. Liu (2014), LncRNAs expression signatures of hepatocellular carcinoma revealed by microarray., World J. Gastroenterol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-KIF20B-4:6
4.1 lnc-KIF20B-4:6
5.0 lnc-KIF20B-4:6
5.1 LINC01374:4
5.2 LINC01374:16