Transcript: LINC01374:17

Basic information

LNCipedia transcript ID: LINC01374:17 
LNCipedia gene ID: LINC01374
Location (hg38): chr10:89888047-90080904
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1912 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000115951.1|ENCT00000048530.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.9792 non-coding 
CPAT coding probability 1.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01374:17 no no no no

Available literature

  1. Liu (2014), LncRNAs expression signatures of hepatocellular carcinoma revealed by microarray., World J. Gastroenterol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-KIF20B-4:7
5.0 lnc-KIF20B-4:7
5.1 LINC01374:5
5.2 LINC01374:17