Transcript: LINC01387:2

Basic information

LNCipedia transcript ID: LINC01387:2 
LNCipedia gene ID: LINC01387
Ensembl Gene ID: ENSG00000265174
Ensembl Transcript ID: ENST00000582386
Location (hg38): chr18:6557822-6558654
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 658 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000582386.1; CTD-2124B20.3-001; OTTHUMT00000442105.1; NONHSAT057114
Alternative gene names: ENSG00000265174.1; CTD-2124B20.3; OTTHUMG00000178468.1; ; AP005202.2; AP005202.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -216.9601 non-coding 
CPAT coding probability 0.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01387:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARHGAP28-2:1
4.0 lnc-ARHGAP28-2:1
4.1 LINC01387:2
5.0 LINC01387:2
5.1 LINC01387:2
5.2 LINC01387:2