Transcript: LINC01389:5

Basic information

LNCipedia transcript ID: LINC01389:5 
LNCipedia gene ID: LINC01389
RefSeq ID: NR_126355
Location (hg38): chr1:47380796-47437317
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 861 bp
Exons: 5
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_126355; NR_126355.1
Alternative gene names: ; LINC01389


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 3.0789 non-coding 
CPAT coding probability 2.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01389:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-STIL-1:5
4.0 LINC01389:5
4.1 LINC01389:5
5.0 LINC01389:5
5.1 LINC01389:5
5.2 LINC01389:5