Transcript: LINC01394:33

Basic information

LNCipedia transcript ID: LINC01394:33 
LNCipedia gene ID: LINC01394
Location (hg38): chr6:1323446-1324860
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 871 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00012640; NONHSAT106445
Alternative gene names: XLOC_005575; linc-HUS1B-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -86.7273 non-coding 
CPAT coding probability 1.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01394:33 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GMDS-2:2
3.1 lnc-GMDS-3:2
4.0 lnc-GMDS-3:2
4.1 lnc-GMDS-3:2
5.0 lnc-GMDS-3:2
5.1 LINC01394:14
5.2 LINC01394:33