Transcript: LINC01402:3

Basic information

LNCipedia transcript ID: LINC01402:3 
LNCipedia gene ID: LINC01402
Location (hg38): chrX:120117795-120119681
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 259 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00017537; NONHSAT138362
Alternative gene names: XLOC_008222; linc-RHOXF1-1; TCONS_00017087


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -104.2751 non-coding 
CPAT coding probability 0.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01402:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RHOXF1-1:3
3.1 lnc-RHOXF1-1:3
4.0 LINC01402:3
4.1 LINC01402:3
5.0 LINC01402:3
5.1 LINC01402:3
5.2 LINC01402:3