Transcript: LINC01425:3

Basic information

LNCipedia transcript ID: LINC01425:3 
LNCipedia gene ID: LINC01425
Location (hg38): chr21:21746985-21797413
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 758 bp
Exons: 5
Sources: Broad Institute
Alternative transcript names: TCONS_00028764
Alternative gene names: XLOC_013878; linc-JAM2-12;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 10.7233 non-coding 
CPAT coding probability 3.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01425:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NCAM2-2:2
3.1 lnc-NCAM2-2:3
4.0 LINC01425:3
4.1 LINC01425:3
5.0 LINC01425:3
5.1 LINC01425:3
5.2 LINC01425:3