Transcript: LINC01426:9

Basic information

LNCipedia transcript ID: LINC01426:9 
LNCipedia gene ID: LINC01426
Location (hg38): chr21:34745840-34784886
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2549 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000234380.1|ENST00000420877.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 2.9862 non-coding 
CPAT coding probability 1.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01426:9 no no no no

Available literature

  1. Morton (2014), Identification of mRNAs and lincRNAs associated with lung cancer progression using next-generation RNA sequencing from laser micro-dissected archival FFPE tissue specimens., Lung Cancer


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC01426:9
5.0 LINC01426:9
5.1 LINC01426:9
5.2 LINC01426:9