Transcript: LINC01432:3

Basic information

LNCipedia transcript ID: LINC01432:3 
LNCipedia gene ID: LINC01432
Location (hg38): chr20:22054193-22074600
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 520 bp
Exons: 4
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: TCONS_00027912; ENST00000449427; ENST00000449427.1; RP11-125P18.1-001; OTTHUMT00000078284.1
Alternative gene names: XLOC_013482; linc-SSTR4-7; ENSG00000234435; RP11-125P18.1; ENSG00000234435.1; OTTHUMG00000032036.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -249.4823 non-coding 
CPAT coding probability 1.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01432:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PAX1-3:1
3.1 lnc-PAX1-3:1
4.0 LINC01432:3
4.1 LINC01432:3
5.0 LINC01432:3
5.1 LINC01432:3
5.2 LINC01432:3