Transcript: LINC01440:13

Basic information

LNCipedia transcript ID: LINC01440:13 
HGNC Gene Symbol: LINC01440    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1440
Ensembl Gene ID: ENSG00000235166
Ensembl Transcript ID: ENST00000625237
Location (hg38): chr20:55465090-55468840
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 622 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000625237.1
Alternative gene names: ENSG00000235166.7; LINC01440;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -132.8877 non-coding 
CPAT coding probability 2.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01440:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 LINC01440:13
4.1 LINC01440:13
5.0 LINC01440:13
5.1 LINC01440:13
5.2 LINC01440:13