Transcript: LINC01442:3

Basic information

LNCipedia transcript ID: LINC01442:3 
LNCipedia gene ID: LINC01442
Location (hg38): chr13:60917042-60920007
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 392 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT034121; ENST00000414201.2
Alternative gene names: ENSG00000227510.2; RP11-196P2.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.6023 non-coding 
CPAT coding probability 5.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01442:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TDRD3-3:3
4.0 LINC01442:3
4.1 LINC01442:3
5.0 LINC01442:3
5.1 LINC01442:3
5.2 LINC01442:3