Transcript: LINC01443:1

Basic information

LNCipedia transcript ID: LINC01443:1 
HGNC Gene Symbol: LINC01443    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1443
Ensembl Gene ID: ENSG00000266554
Ensembl Transcript ID: ENST00000584531
Location (hg38): chr18:14946267-14973739
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1854 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000584531.1; RP11-527H14.2-001; OTTHUMT00000443403.1; NONHSAT058542
Alternative gene names: ENSG00000266554.1; RP11-527H14.2; OTTHUMG00000178811.1; LINC01443;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.2577 non-coding 
CPAT coding probability 36.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01443:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANKRD30B-4:1
4.0 LINC01443:1
4.1 LINC01443:1
5.0 LINC01443:1
5.1 LINC01443:1
5.2 LINC01443:1