Transcript: LINC01444:3

Basic information

LNCipedia transcript ID: LINC01444:3 
HGNC Gene Symbol: LINC01444    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1444
Ensembl Gene ID: ENSG00000264301
Ensembl Transcript ID: ENST00000581211
Location (hg38): chr18:14969001-14969757
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 654 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000581211.1; RP11-527H14.3-002; OTTHUMT00000443405.1; NONHSAT058543
Alternative gene names: ENSG00000264301.1; RP11-527H14.3; OTTHUMG00000178812.1; LINC01444;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -48.713 non-coding 
CPAT coding probability 3.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01444:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-POTEC-3:2
4.0 LINC01444:3
4.1 LINC01444:3
5.0 LINC01444:3
5.1 LINC01444:3
5.2 LINC01444:3