Transcript: LINC01465:3

Basic information

LNCipedia transcript ID: LINC01465:3 
HGNC Gene Symbol: LINC01465    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1465
Ensembl Gene ID: ENSG00000221949
Ensembl Transcript ID: ENST00000623670
Location (hg38): chr12:62602649-62603428
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 780 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000623670.2
Alternative gene names: ENSG00000221949.5; LINC01465; FLJ25590


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -153.235 non-coding 
CPAT coding probability 51.16% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01465:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 LINC01465:3
4.1 LINC01465:3
5.0 LINC01465:3
5.1 LINC01465:3
5.2 LINC01465:3