Transcript: LINC01473:12

Basic information

LNCipedia transcript ID: LINC01473:12 
LNCipedia gene ID: LINC01473
Location (hg38): chr2:186427584-186486067
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 9668 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000226747.2|ENCT00000250998.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 19.9574 non-coding 
CPAT coding probability 20.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01473:12 no no no no

Available literature

  1. Brueckner (2012), Genomic rearrangements at the FRA2H common fragile site frequently involve non-homologous recombination events across LTR and L1(LINE) repeats., Hum. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC01473:12
5.0 LINC01473:12
5.1 LINC01473:12
5.2 LINC01473:12