Transcript: LINC01477:1

Basic information

LNCipedia transcript ID: LINC01477:1 
LNCipedia gene ID: LINC01477
Location (hg38): chr18:40066286-40099232
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1225 bp
Exons: 4
Sources: Broad Institute
Alternative transcript names: TCONS_00026191
Alternative gene names: XLOC_012665; linc-PIK3C3-1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -64.3687 non-coding 
CPAT coding probability 0.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01477:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PIK3C3-1:1
3.1 lnc-PIK3C3-1:2
4.0 LINC01477:1
4.1 LINC01477:1
5.0 LINC01477:1
5.1 LINC01477:1
5.2 LINC01477:1