Transcript: LINC01479:1

Basic information

LNCipedia transcript ID: LINC01479:1 
HGNC Gene Symbol: LINC01479    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1479
Ensembl Gene ID: ENSG00000255772
Ensembl Transcript ID: ENST00000545520
Location (hg38): chr12:67929235-67932948
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 509 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000545520; ENST00000545520.1; GS1-410F4.4-002; OTTHUMT00000402291.1; NONHSAT029269; ENST00000545520.5
Alternative gene names: ENSG00000255772; GS1-410F4.4; ENSG00000255772.1; OTTHUMG00000169106.1; ENSG00000255772.5; LINC01479;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -53.5468 non-coding 
CPAT coding probability 9.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01479:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DYRK2-2:1
3.1 lnc-DYRK2-2:1
4.0 LINC01479:1
4.1 LINC01479:1
5.0 LINC01479:1
5.1 LINC01479:1
5.2 LINC01479:1