Transcript: LINC01480:6

Basic information

LNCipedia transcript ID: LINC01480:6 
HGNC Gene Symbol: LINC01480    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1480
Ensembl Gene ID: ENSG00000270164
Ensembl Transcript ID: ENST00000494375
Location (hg38): chr19:41535567-41536904
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 409 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT066466; ENST00000494375.2
Alternative gene names: ENSG00000270164.1; AC006129.4; LINC01480;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 27.3554 non-coding 
CPAT coding probability 2.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01480:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CEACAM21-2:5
4.0 LINC01480:6
4.1 LINC01480:6
5.0 LINC01480:6
5.1 LINC01480:6
5.2 LINC01480:6