Transcript: LINC01481:1

Basic information

LNCipedia transcript ID: LINC01481:1 
HGNC Gene Symbol: LINC01481    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1481
Ensembl Gene ID: ENSG00000257613
Ensembl Transcript ID: ENST00000552998
Location (hg38): chr12:70219132-70221862
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 629 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000552998.1; RP11-320P7.1-001; OTTHUMT00000404081.1; NONHSAT029393
Alternative gene names: ENSG00000257613.1; RP11-320P7.1; OTTHUMG00000169448.1; LINC01481;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -120.7292 non-coding 
CPAT coding probability 0.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01481:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PTPRB-2:1
4.0 LINC01481:1
4.1 LINC01481:1
5.0 LINC01481:1
5.1 LINC01481:1
5.2 LINC01481:1