Transcript: LINC01486:4

Basic information

LNCipedia transcript ID: LINC01486:4 
LNCipedia gene ID: LINC01486
RefSeq ID: NR_120462
Location (hg38): chr12:109354187-109359488
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 612 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_120462; NR_120462.1
Alternative gene names: TCONS_00021407; LINC01486


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -26.9348 non-coding 
CPAT coding probability 30.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01486:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FOXN4-1:4
4.0 LINC01486:4
4.1 LINC01486:4
5.0 LINC01486:4
5.1 LINC01486:4
5.2 LINC01486:4